Rapid acidification of the ocean during the Paleocene-Eocene thermal maximum

The Paleocene-Eocene thermal maximum (PETM) has been attributed to the rapid release of approximately 2000 x 10(9) metric tons of carbon in the form of methane. In theory, oxidation and ocean absorption of this carbon should have lowered deep-sea pH, thereby triggering a rapid (<10,000-year) shoaling of the calcite compensation depth (CCD), followed by gradual recovery. Here we present geochemical data from five new South Atlantic deep-sea sections that constrain the timing and extent of massive sea-floor carbonate dissolution coincident with the PETM. The sections, from between 2.7 and 4.8 kilometers water depth, are marked by a prominent clay layer, the character of which indicates that the CCD shoaled rapidly (<10,000 years) by more than 2 kilometers and recovered gradually (>100,000 years). These findings indicate that a large mass of carbon (>2000 x 10(9) metric tons of carbon) dissolved in the ocean at the Paleocene-Eocene boundary and that permanent sequestration of this carbon occurred through silicate weathering feedback.     

Improvement of Rice Production under Drought Conditions in West Africa: Application of QTLs in Breeding for Drought Resistance

Rice plays a paramount role in food and nutrition security in many West African countries. Despite the doubling of production during the last decade, rice consumption has grown faster, creating a deficit between the demand and supply. Although the West African sub-region remains the main rice-producing centre on the continent, production is severely hampered by biotic and abiotic stresses. Drought is one of the factors that most severely reduce grain yields of rice. Systems of production need to be established in order to mitigate yield loss as a result of drought. This review discusses the effects of drought on rice production in West Africa and its mitigation with an emphasis on the improvement of tolerance to drought stress. Yield stability can be achieved by developing drought-tolerant varieties through several processes encompassing profiling of known QTLs and identification of new ones, marker-assisted selection, genomic selection, and extensive multi-locational yield trials. We suggest a comprehensive strategy for breeding drought-tolerant rice varieties in West Africa.     

Colonisation by arbuscular mycorrhizal and fine endophytic fungi in four woodland grasses – variation in relation to pH and aluminium

Acidic soils are harsh environments for plants. One of the major problems is the potential toxicity of aluminium (Al) and hydrogen ions at a pH below 5; another is the shortage of nutrients usually accompanying soil acidity. The aim of this study was to elucidate the relationship between arbuscular mycorrhizal (AM) colonisation and soil acidity (measured by pH and Al concentration) in order to evaluate the possibility that AM fungi facilitate the existence of plants on acidic soils. We sampled tussocks of four grass species, Elymus caninus, Poa nemoralis, Deschampsia cespitosa and Deschampsia flexuosa, together with samples of the surrounding soil, in oak forests of varying soil pH in southern Sweden. We determined pH, easily reacting Al (Al_r), extractable Al (Al_BaCl2) and phosphate in the soil samples, analysed the shoots for Al and phosphorous and quantified the degree of AM and fine endophyte (FE) colonisation in the roots. E. caninus was found on the least acidic soils and had the highest AM colonisation of all the species studied, while D. flexuosa, which was found on the most acidic soils, had the lowest AM colonisation. P. nemoralis and D. cespitosa were intermediate with respect to pH and AM colonisation. The colonisation of AM fungi exceeded FE colonisation for E. caninus and P. nemoralis, while the opposite was true for the two Deschampsia species. Our results indicated a negative relationship between Al_r and the degree of AM colonisation at the within-species level. The low colonisation of AM fungi on acidic soils may to some extent be explained by a sensitivity of AM fungi to Al_r: this parameter showed a stronger negative association with AM colonisation than did pH and Al_BaCl2. We hypothesize that Al toxicity is a critical factor for plant nutrition in forest soils through the impact on symbiotic fungi.     

Effects of human recombinant alpha-2b interferon and feline recombinant omega interferon on in vitro replication of feline herpesvirus-1

OBJECTIVE: To evaluate the effects of recombinant human interferon alpha-2b (rHuIFN-alpha2b) and recombinant feline interferon omega (rFeIFN-omega) on in vitro replication of feline herpesvirus (FHV)-1. SAMPLE POPULATION: Cultures of Crandell-Rees feline kidney (CRFK) cells. PROCEDURES: CRFK cells were treated with rFeIFN-omega or rHuIFN-alpha2b at concentrations ranging from 100 to 500,000 U/mL. Cultures were then inoculated with FHV-1. Constant concentrations of interferon products were maintained throughout the study. Reductions in the number and size of plaques were used as indicators of antiviral activity. Six plaque reduction assays were performed in duplicate. A 3-(4, 5-dimethylthiazolyl-2)-2, 5-diphenyltetrazolium bromide assay was used to detect cytotoxic effects of interferon. A 1-way ANOVA and Dunnett test were used to determine significant differences. RESULTS: Treatment with rFeIFN-omega at various concentrations resulted in significant reductions in the number of plaques (100,000 U/mL, 54.7%; and 500,000 U/mL, 59.8%) and in plaque size (100,000 U/mL, 47.5%; 250,000 U/mL, 81.0%; and 500,000 U/mL; 70.5%). Treatment with various concentrations of rHuIFN-alpha2b resulted in a significant reduction in plaque size (100,000 U/mL, 56.0%; 250,000 U/mL, 75.7%; and 500,000 U/mL, 69.0%). None of the tested concentrations of interferon caused significant cellular toxicosis. CONCLUSIONS AND CLINICAL RELEVANCE: At some of the higher concentrations, the antiviral effect of rFeIFN-omega was greater than the antiviral effect of rHuIFN-alpha2b. Reduction in plaque size appeared to be a good indicator of the antiviral activity of interferon against FHV-1.     

High genetic diversity and lack of pronounced population structure in five species of sympatric Pacific eels

Understanding the population structure of tropical anguillids residing in the Pacific is vital for their conservation management. Here, the population genetic structure of five sympatric freshwater eels (Anguilla marmorata Quoy & Gaimard, A. megastoma Kaup, A. obscura Steindachner, A. reinhardtii Günther and A. australis Richardson) across 11 western South Pacific (WSP) islands was investigated based on partial nucleotide sequences of the mtDNA control region and the nuclear GTH2b genes of 288 newly collected samples jointly with existing sequences. WSP anguillids are characterised by overall high levels of genetic diversity. Both mtDNA and nuclear sequences provided no evidence for distinct geographic clines or barriers in any of the species across the WSP. The occurrence of admixed individuals between A. marmorata and A. megastoma was confirmed, and a new possible occurrence of a further species was revealed (A. interioris Whitley on Bougainville Island). All species showed evidence for demographic population growth in the Pleistocene, and a subsequent population reduction for A. megastoma. Common spawning grounds and mixing of larvae by ocean currents could promote the lack of pronounced isolation by distance, a finding that has significant implications for the future management of anguillids in the area.